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The COPILOT Raw Illumina Genotyping QC Protocol.

Current protocols - 1 Apr 2022

Patel Hamel, Lee Sang-Hyuck, Breen Gerome, Menzel Stephen, Ojewunmi Oyesola, Dobson Richard J B

Abstract excerpt

The Illumina genotyping microarrays generate data in image format, which is processed by the platform-specific software GenomeStudio, followed by an array of complex bioinformatics analyses that rely on various software, different programming languages, and numerous dependencies to be installed and configured correctly. The entire process can be time-consuming, can lead to reproducibility errors, and can be a...

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PMID: 35452565
DOI: 10.1002/cpz1.373

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