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Article

Quality Control for the Illumina HumanExome BeadChip.

Current protocols in human genetics - 1 Jul 2016

Igo Robert P, Cooke Bailey Jessica N, Romm Jane, Haines Jonathan L, Wiggs Janey L

Abstract excerpt

The Illumina HumanExome BeadChip and other exome-based genotyping arrays offer inexpensive genotyping of some 240,000 mostly nonsynonymous coding variants across the human genome. The HumanExome chip, with its highly non-uniform distribution of markers and emphasis on rare coding variants, presents some unique challenges for quality control (QC) and data cleaning. Here, we describe QC procedures for HumanExome...

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PMID: 27367164
DOI: 10.1002/cphg.15
PMCID: PMC5100670

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