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Article

Comparison among three variant callers and assessment of the accuracy of imputation from SNP array data to whole-genome sequence level in chicken.

BMC genomics - 21 Oct 2015

Ni Guiyan, Strom Tim M, Pausch Hubert, Reimer Christian, Preisinger Rudolf, Simianer Henner, Erbe Malena

Abstract excerpt

BACKGROUND: The technical progress in the last decade has made it possible to sequence millions of DNA reads in a relatively short time frame. Several variant callers based on different algorithms have emerged and have made it possible to extract single nucleotide polymorphisms (SNPs) out of the whole-genome sequence. Often, only a few individuals of a population are sequenced completely and imputation is used to...

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PMID: 26486989
DOI: 10.1186/s12864-015-2059-2
PMCID: PMC4618161

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

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