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Short communication: Accuracy of whole-genome sequence imputation in Angus cattle using within-breed and multi breed reference populations.

Animal : an international journal of animal bioscience - 1 Mar 2024

Kamprasert N, Aliloo H, van der Werf J H J, Clark S A

Abstract excerpt

Genotype imputation is a standard approach used in the field of genetics. It can be used to fill in missing genotypes or to increase genotype density. Accurate imputed genotypes are required for downstream analyses. In this study, the accuracy of whole-genome sequence imputation for Angus beef cattle was examined using two different ways to form the reference panel, a within-breed reference population and a multi...

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PMID: 38364656
DOI: 10.1016/j.animal.2024.101087

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