Article
Sequence-based ultra-dense genetic and physical maps reveal structural variations of allopolyploid cotton genomes.
Genome biology - 24 May 2015
Wang Sen, Chen Jiedan, Zhang Wenpan, Hu Yan, Chang Lijing, Fang Lei, Wang Qiong, Lv Fenni, Wu Huaitong, Si Zhanfeng, Chen Shuqi, Cai Caiping, Zhu Xiefei, Zhou Baoliang, Guo Wangzhen, Zhang Tianzhen
Abstract excerpt
BACKGROUND: SNPs are the most abundant polymorphism type, and have been explored in many crop genomic studies, including rice and maize. SNP discovery in allotetraploid cotton genomes has lagged behind that of other crops due to their complexity and polyploidy. In this study, genome-wide SNPs are detected systematically using next-generation sequencing and efficient SNP genotyping methods, and used to construct a...
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