Article
Imputation of sequence level genotypes in the Franches-Montagnes horse breed.
Genetics, selection, evolution : GSE - 1 Oct 2014
Frischknecht Mirjam, Neuditschko Markus, Jagannathan Vidhya, Drögemüller Cord, Tetens Jens, Thaller Georg, Leeb Tosso, Rieder Stefan
Abstract excerpt
BACKGROUND: A cost-effective strategy to increase the density of available markers within a population is to sequence a small proportion of the population and impute whole-genome sequence data for the remaining population. Increased densities of typed markers are advantageous for genome-wide association studies (GWAS) and genomic predictions. METHODS: We obtained genotypes for 54 602 SNPs (single nucleotide...
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