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Article

Delineating community outbreaks of Salmonella enterica serovar Typhimurium by use of whole-genome sequencing: insights into genomic variability within an outbreak.

Journal of clinical microbiology - 1 Apr 2015

Octavia Sophie, Wang Qinning, Tanaka Mark M, Kaur Sandeep, Sintchenko Vitali, Lan Ruiting

Abstract excerpt

Whole-genome next-generation sequencing (NGS) was used to retrospectively examine 57 isolates from five epidemiologically confirmed community outbreaks (numbered 1 to 5) caused by Salmonella enterica serovar Typhimurium phage type DT170. Most of the human and environmental isolates confirmed epidemiologically to be involved in the outbreaks were either genomically identical or differed by one or two single...

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Identifiers

PMID: 25609719
DOI: 10.1128/JCM.03235-14
PMCID: PMC4365247

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