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Investigation of Outbreaks of Salmonella enterica Serovar Typhimurium and Its Monophasic Variants Using Whole-Genome Sequencing, Denmark.

Emerging infectious diseases - 1 Oct 2017

Gymoese Pernille, Sørensen Gitte, Litrup Eva, Olsen John Elmerdal, Nielsen Eva Møller, Torpdahl Mia

Abstract excerpt

Whole-genome sequencing is rapidly replacing current molecular typing methods for surveillance purposes. Our study evaluates core-genome single-nucleotide polymorphism analysis for outbreak detection and linking of sources of Salmonella enterica serovar Typhimurium and its monophasic variants during a 7-month surveillance period in Denmark. We reanalyzed and defined 8 previously characterized outbreaks from the...

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Identifiers

PMID: 28930002
DOI: 10.3201/eid2310.161248
PMCID: PMC5621559

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