Article
Comparative analysis of subtyping methods against a whole-genome-sequencing standard for Salmonella enterica serotype Enteritidis.
Journal of clinical microbiology - 1 Jan 2015
Deng Xiangyu, Shariat Nikki, Driebe Elizabeth M, Roe Chandler C, Tolar Beth, Trees Eija, Keim Paul, Zhang Wei, Dudley Edward G, Fields Patricia I, Engelthaler David M
Abstract excerpt
A retrospective investigation was performed to evaluate whole-genome sequencing as a benchmark for comparing molecular subtyping methods for Salmonella enterica serotype Enteritidis and survey the population structure of commonly encountered S. enterica serotype Enteritidis outbreak isolates in the United States. A total of 52 S. enterica serotype Enteritidis isolates representing 16 major outbreaks and three...
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