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Article

Effect of diversity and missing data on genetic assignment with RAD-Seq markers.

BMC research notes - 25 Nov 2014

Chattopadhyay Balaji, Garg Kritika M, Ramakrishnan Uma

Abstract excerpt

Reduced representation libraries are being used as a preferred source of markers to address population genetic questions. However, libraries of RAD-Seq variants often suffer from significant percentage of missing data. In addition, algorithms used to mine SNPs from the raw data may also underscore biological variation. We investigate the effect of biological diversity in mining SNPs from the program STACKS and...

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Identifiers

PMID: 25424532
DOI: 10.1186/1756-0500-7-841
PMCID: PMC4256836

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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