Article
Multiple Gaussian network modes alignment reveals dynamically variable regions: the hemoglobin case.
Proteins - 1 Sept 2014
Davis Meir, Tobi Dror
Abstract excerpt
Gaussian network model (GNM) modes of motion are calculated to a dataset of hemoglobin (Hb) structures and modes with dynamics similarity to the T state are multiply aligned. The sole criterion for the alignment is the mode shape itself and not sequence or structural similarity. Standard deviation (SD) of the GNM value score along the alignment is calculated, regions with high SD are defined as dynamically...
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