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Article

A tree-based approach for motif discovery and sequence classification.

Bioinformatics (Oxford, England) - 1 Aug 2011

Yan Rui, Boutros Paul C, Jurisica Igor

Abstract excerpt

MOTIVATION: Pattern discovery algorithms are widely used for the analysis of DNA and protein sequences. Most algorithms have been designed to find overrepresented motifs in sparse datasets of long sequences, and ignore most positional information. We introduce an algorithm optimized to exploit spatial information in sparse-but-populous datasets. RESULTS: Our algorithm Tree-based Weighted-Position Pattern...

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PMID: 21685048
DOI: 10.1093/bioinformatics/btr353

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

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