Article
Genomic DNA pooling strategy for next-generation sequencing-based rare variant discovery in abdominal aortic aneurysm regions of interest-challenges and limitations.
Journal of cardiovascular translational research - 1 Jun 2011
Harakalova Magdalena, Nijman Isaäc J, Medic Jelena, Mokry Michal, Renkens Ivo, Blankensteijn Jan D, Kloosterman Wigard, Baas Annette F, Cuppen Edwin
Abstract excerpt
The costs and efforts for sample preparation of hundreds of individuals, their genomic enrichment for regions of interest, and sufficient deep sequencing bring a significant burden to next-generation sequencing-based experiments. We investigated whether pooling of samples at the level of genomic DNA would be a more versatile strategy for lowering the costs and efforts for common disease-associated rare variant...
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