Article
Analysis of population structure: a unifying framework and novel methods based on sparse factor analysis.
PLoS genetics - 16 Sept 2010
Engelhardt Barbara E, Stephens Matthew
Abstract excerpt
We consider the statistical analysis of population structure using genetic data. We show how the two most widely used approaches to modeling population structure, admixture-based models and principal components analysis (PCA), can be viewed within a single unifying framework of matrix factorization. Specifically, they can both be interpreted as approximating an observed genotype matrix by a product of two...
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