Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Graphical analysis and experimental evaluation of Saccharomyces cerevisiae PTRK1|2 and PBMH1|2 promoter region.

Genome informatics. International Conference on Genome Informatics - 1 Jan 2010

Gerber Susanne, Hasenbrink Guido, Hendriksen Wouter, Van Heusden Paul, Ludwig Jost, Klipp Edda, Lichtenberg-Fraté Hella

Abstract excerpt

We designed a simple graphical presentation for the results of a transcription factor (TF) pattern matching analysis. The TF analysis algorithm utilized known sequence signature motifs from several databases. The graphical presentation enabled a quick overview of potential TF binding sites, their frequency and spacing on both DNA strands and thus straight forward identification of promising candidates for further...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to 14-3-3 Proteins
Share to Cation Transport Proteins

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Computational Biology

Share to Computer Graphics

Share to DNA, Fungal

Share to Gene Expression Regulation, Fungal

Share to Saccharomyces cerevisiae Proteins

Share to Sequence Homology, Nucleic Acid

Source

Identifiers

PMID: 20238415

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Graphical analysis and experimental evaluation of Saccharomyces cerevisiae PTRK1|2 and PBMH1|2 promoter region.PMID 20238415Read ↗

The C-terminal region of the Hot1 transcription factor binds GGGACAAA-related sequences in the promoter of its target genes.Semantic proximity Read ↗

Identifying transcription factor functions and targets by phenotypic activation.Semantic proximity Read ↗

YEASTRACT+: a portal for cross-species comparative genomics of transcription regulation in yeastsSemantic proximity Read ↗

The ability of transcription factors to differentially regulate gene expression is a crucial component of the mechanism underlying inversion, a frequently observed genetic interaction patternSemantic proximity Read ↗

YAGM: a web tool for mining associated genes in yeast based on diverse biological associations.Semantic proximity Read ↗

Yap, a novel family of eight bZIP proteins in Saccharomyces cerevisiae with distinct biological functions.Semantic proximity Read ↗

Deletions of SKY1 or PTK2 in the Saccharomyces cerevisiae trk1Deltatrk2Delta mutant cells exert dual effect on ion homeostasis.Semantic proximity Read ↗

The transcription factor GCN4 regulates PHM8 and alters triacylglycerol metabolism in Saccharomyces cerevisiae.Semantic proximity Read ↗

Identification of transcription factor targets by phenotypic activation and microarray expression profiling in yeast.Semantic proximity Read ↗

Histidine Phosphotransfer Proteins in Fungal Two-Component Signal Transduction PathwaysSemantic proximity Read ↗

Trm1p, a Zn(II)2Cys6-type transcription factor, is a master regulator of methanol-specific gene activation in the methylotrophic yeast Candida boidinii.Semantic proximity Read ↗

Functional analysis of upstream regulating regions from the Yarrowia lipolytica XPR2 promoter.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.