Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

NBD-based green fluorescent ligands for typing of thymine-related SNPs by using an abasic site-containing probe DNA.

Chembiochem : a European journal of chemical biology - 4 Jan 2010

Thiagarajan Viruthachalam, Rajendran Arivazhagan, Satake Hiroyuki, Nishizawa Seiichi, Teramae Norio

Abstract excerpt

The binding behavior of green fluorescent ligands, derivatives of 7-nitrobenzo-2-oxa-1,3-diazole (NBD), with DNA duplexes containing an abasic (AP) site is studied by thermal denaturation and fluorescence experiments. Among NBD derivatives, N(1)-(7-nitrobenzo[c][1,2,5]oxadiazol-4-yl)propane-1,3-d...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Azoles
Share to DNA Probes
Share to Fluorescent Dyes

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Pteridines

Share to Spectrometry, Fluorescence

Share to Thermodynamics

Share to Thymine

Share to Transition Temperature

Source

Identifiers

PMID: 19950344
DOI: 10.1002/cbic.200900530

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 2 Sept 2026. Prepared record publication-19950344-2026-09-02.2. Manifest publication-graph-cohort-2026-09-02.2.

Source receipt: PubMed via Helena Literature Corpus, retrieved 2 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

NBD-based green fluorescent ligands for typing of thymine-related SNPs by using an abasic site-containing probe DNA.PMID 19950344Read ↗

Fluorescence detection of thymidine-related single-nucleotide polymorphisms by 3, 5-diaminopyrazine derivatives.Semantic proximity Read ↗

Hydrogen bond-mediated binding of ligands to a nucleobase at a gap site in a DNA duplex and its use for fluorescence detection of single-nucleotide polymorphisms.Semantic proximity Read ↗

Strong binding of naphthyridine derivatives to cytosine in an AP site-containing DNA duplex and their application to fluorescence detection of single nucleotide polymorphisms.Semantic proximity Read ↗

Label-free molecular beacon system based on DNAs containing abasic sites and fluorescent ligands that bind abasic sites.Semantic proximity Read ↗

Design of base-discriminating fluorescent nucleoside and its application to t/c SNP typing.Semantic proximity Read ↗

Fluorescence emission detection of single-nucleotide polymorphisms by a naphthyridine-benzofurazan conjugate.Semantic proximity Read ↗

Use of abasic site-containing DNA for electrochemical SNPs detection.Semantic proximity Read ↗

Synthesis of naphthyridine-conjugated DNA probes and their application to SNPs typing.Semantic proximity Read ↗

Clear distinction of purine bases on the complementary strand by a fluorescence change of a novel fluorescent nucleoside.Semantic proximity Read ↗

Fluorescence detection of single nucleotide polymorphisms using a universal molecular beacon.Semantic proximity Read ↗

Anthracene based base-discriminating fluorescent oligonucleotide probes for SNPs typing: synthesis and photophysical properties.Semantic proximity Read ↗

New method for scanning of single-nucleotide polymorphisms (SNPs): recognition of guanine-guanine mismatches by dimeric naphthyridine.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.