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Article

PrimerSNP: a web tool for whole-genome selection of allele-specific and common primers of phylogenetically-related bacterial genomic sequences.

BMC microbiology - 20 Oct 2008

Yao Jiqiang, Lin Hong, Van Deynze Allen, Doddapaneni Harshavardhan, Francis Martha, Lemos Eliana Gertrudes Macedo, Civerolo Edwin L

Abstract excerpt

BACKGROUND: The increasing number of genomic sequences of bacteria makes it possible to select unique SNPs of a particular strain/species at the whole genome level and thus design specific primers based on the SNPs. The high similarity of genomic sequences among phylogenetically-related bacteria requires the identification of the few loci in the genome that can serve as unique markers for strain differentiation....

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PMID: 18937861
DOI: 10.1186/1471-2180-8-185
PMCID: PMC2579435

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

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