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Evaluation of the taxonomic accuracy and pathogenicity prediction power of 16 primer sets amplifying single copy marker genes in the Pseudomonas syringae species complex

2022-11-01

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<h4>ABSTRACT</h4> The Pseudomonas syringae species complex is comprised of several closely related species of bacterial plant pathogens. Here, we use in-silico methods to assess 16 PCR primer sets designed for broad identification of isolates throughout the species complex. We evaluate their in-silico amplification rate in 2,161 publicly available genomes, the correlation between pairwise amplicon sequence distan...

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Literature Corpus work: 46565186-2c77-53c4-81a2-7e6cdad95b70
DOI: 10.1101/2022.11.01.514712

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Evaluation of the taxonomic accuracy and pathogenicity prediction power of 16 primer sets amplifying single copy marker genes in the Pseudomonas syringae species complexDOI 10.1101/2022.11.01.514712Read

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Evaluation of the taxonomic accuracy and pathogenicity prediction power of 16 primer sets amplifying single copy marker genes in the <i>Pseudomonas syringae</i> species complex

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