Article
Investigations of oligonucleotide usage variance within and between prokaryotes.
PLoS computational biology - 18 Apr 2008
Bohlin Jon, Skjerve Eystein, Ussery David W
Abstract excerpt
Oligonucleotide usage in archaeal and bacterial genomes can be linked to a number of properties, including codon usage (trinucleotides), DNA base-stacking energy (dinucleotides), and DNA structural conformation (di- to tetranucleotides). We wanted to assess the statistical information potential of different DNA 'word-sizes' and explore how oligonucleotide frequencies differ in coding and non-coding regions. In...
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