High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia.

doi:10.1128/JCM.02249-07

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Article

High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia.

Journal of clinical microbiology - 1 May 2008

Baker Stephen, Holt Kathryn, van de Vosse Esther, Roumagnac Philippe, Whitehead Sally, King Emma, Ewels Philip, Keniry Andrew, Weill François-Xavier, Lightfoot Diane, van Dissel Jaap T, Sanderson Kenneth E, Farrar Jeremy, Achtman Mark, Deloukas Panagiotis, Dougan Gordon

Abstract excerpt

High-throughput epidemiological typing systems that provide phylogenetic and genotypic information are beneficial for tracking bacterial pathogens in the field. The incidence of Salmonella enterica serovar Typhi infection in Indonesia is high and is associated with atypical phenotypic traits such as expression of the j and the z66 flagellum antigens. Utilizing a high-throughput genotyping platform to investigate...

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PMID: 18322069
DOI: 10.1128/JCM.02249-07
PMCID: PMC2395080

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

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