Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Recombination estimation under complex evolutionary models with the coalescent composite-likelihood method.

Molecular biology and evolution - 1 Apr 2006

Carvajal-Rodríguez Antonio, Crandall Keith A, Posada David

Abstract excerpt

The composite-likelihood estimator (CLE) of the population recombination rate considers only sites with exactly two alleles under a finite-sites mutation model (McVean, G. A. T., P. Awadalla, and P. Fearnhead. 2002. A coalescent-based method for detecting and estimating recombination from gene sequences. Genetics 160:1231-1241). While in such a model the identity of alleles is not considered, the CLE has been...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Codon
Share to Computer Simulation
Share to Gene Products, env

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Likelihood Functions

Share to Longitudinal Studies

Share to Recombination, Genetic

Share to Selection, Genetic

Source

Open in PubMed Open full text

Identifiers

PMID: 16452117
DOI: 10.1093/molbev/msj102
PMCID: PMC1949848

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Recombination estimation under complex evolutionary models with the coalescent composite-likelihood method.PMID 16452117Read ↗

A coalescent-based method for detecting and estimating recombination from gene sequences.Semantic proximity Read ↗

A composite-likelihood approach for detecting directional selection from DNA sequence data.Semantic proximity Read ↗

Approximating the coalescent with recombination.Semantic proximity Read ↗

A simple and robust statistical test for detecting the presence of recombination.Semantic proximity Read ↗

Coalescent Inference Using Serially Sampled, High-Throughput Sequencing Data from Intrahost HIV Infection.Semantic proximity Read ↗

Detection of recombination events in bacterial genomes from large population samplesSemantic proximity Read ↗

Recoverability of ancestral recombination graph topologies.Semantic proximity Read ↗

A Bayesian approach to infer recombination patterns in coronavirusesSemantic proximity Read ↗

Recombination patterns in coronavirusesSemantic proximity Read ↗

An accurate method for identifying recent recombinants from unaligned sequences.Semantic proximity Read ↗

Evaluating genetic diversity differences within a likelihood framework.Semantic proximity Read ↗

Recombination and the properties of Tajima's D in the context of approximate-likelihood calculation.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.