Article

High Coverage Highly Accurate Long-Read Sequencing of a Mouse Neuronal Cell Line Using the PacBio Revio Sequencer

2023-06-07

Abstract excerpt

<h4>ABSTRACT</h4> Recently, Pacific Biosciences released a new highly accurate long-read sequencer called the Revio System that is projected to generate 30× HiFi whole-genome sequencing for the human genome within one sequencing SMRT Cell. Mouse and human genomes are similar in size. In this study, we sought to test this new sequencer by characterizing the genome and epigenome of the mouse neuronal cell line Neur...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: f93b437a-e3cb-5cbf-bff0-759c7b4bf8c0
DOI: 10.1101/2023.06.06.543940

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

High Coverage Highly Accurate Long-Read Sequencing of a Mouse Neuronal Cell Line Using the PacBio Revio SequencerDOI 10.1101/2023.06.06.543940Read

DIANA: An integrated pipeline for analysis of long-read whole-genome sequencing data for molecular neuropathologySemantic proximity Read

<i>De novo</i> assembly, delivery and expression of a 101 kb human gene in mouse cellsSemantic proximity Read

Nanopore sequencing and assembly of a human genome with ultra-long readsSemantic proximity Read

Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylationSemantic proximity Read

High-throughput single nucleotide variant discovery in E14 mouse embryonic stem cells provides a new reference genome assembly.Semantic proximity Read

VISTA: An integrated framework for structural variant discoverySemantic proximity Read

Fast and accurate assembly of Nanopore reads via progressive error correction and adaptive read selectionSemantic proximity Read

Sentieon DNAscope LongRead – A highly Accurate, Fast, and Efficient Pipeline for Germline Variant Calling from PacBio HiFi readsSemantic proximity Read

Unbiased Long-Read Whole-Genome Sequencing Enables High-Resolution Mapping of Transgene Concatenation and Off-target Genomic Disruption in a Mouse ModelSemantic proximity Read

LEMONmethyl-seq: Targeted long-read DNA methylation profiling reveals dynamics of CRISPR epigenome editing and endogenous DNA methylation patternsSemantic proximity Read

Comprehensive profiling of L1 retrotransposons in mouseSemantic proximity Read

The rate and spectrum of new mutations in mice inferred by long-read sequencing.Semantic proximity Read