Article

hAMRoaster: a tool for comparing performance of AMR gene detection software

2022-01-15

Abstract excerpt

<h4>Background</h4> The use of shotgun metagenomics for AMR detection is appealing because data can be generated from clinical samples with minimal processing. Detecting antimicrobial resistance (AMR) in clinical genomic data is an important epidemiological task, yet a complex bioinformatic process. Many software tools exist to detect AMR genes, but they have mostly been tested in their detection of genotypic res...

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Literature Corpus work: f4563c1a-d20d-54f6-9407-3bd49e4a73ab
DOI: 10.1101/2022.01.13.476279

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