Article

VCF2CNA: A tool for efficiently detecting copy-number alterations in VCF genotype data

2017-04-26

Abstract excerpt

VCF2CNA is a web interface tool for copy-number alteration (CNA) analysis of VCF and other variant file formats. We applied it to 46 adult glioblastoma and 146 pediatric neuroblastoma samples sequenced by Illumina and Complete Genomics (CGI) platforms respectively. VCF2CNA was highly consistent with a state-of-the-art algorithm using raw sequencing data (mean F1-score=0.994) in high-quality glioblastoma samples an...

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Literature Corpus work: ddd72137-4c95-5a3e-816d-6a6bd517b859
DOI: 10.1101/131235

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