Article

scEGOT: Single-cell trajectory inference framework based on entropic Gaussian mixture optimal transport

2023-09-14

Abstract excerpt

Time-series scRNA-seq data have opened a door to elucidate cell differentiation, and in this context, the optimal transport theory has been attracting much attention. However, there remain critical issues in interpretability and computational cost. We present scEGOT, a comprehensive framework for single-cell trajectory inference, as a generative model with high interpretability and low computational cost. Applied...

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Literature Corpus work: d84a7933-2407-5ff4-a210-2fe1158e7b0a
DOI: 10.1101/2023.09.11.557102

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