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Pathotypr: harmonised MTBC lineage assignment and resistance-associated variant detection for genomic surveillance

2026-03-27

Abstract excerpt

<h4>BACKGROUND</h4> Rapid, interoperable whole-genome tools for Mycobacterium tuberculosis complex (MTBC) surveillance remain limited for harmonised lineage assignment across recognised lineages and simultaneous resistance-associated variant detection. <h4>AIM</h4> To develop and validate Pathotypr, an alignment-free tool for harmonised MTBC lineage assignment and resistance genotyping from assemblies and raw re...

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Literature Corpus work
cd5051c6-012b-57b1-81d6-754678a6d274
DOI
10.64898/2026.03.24.714002
Open publication

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Pathotypr: harmonised MTBC lineage assignment and resistance-associated variant detection for genomic surveillanceDOI 10.64898/2026.03.24.714002
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