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A pipeline for constructing reference genomes for large cohort-specific metagenome compression

2023-09-12

Abstract excerpt

Metagenomic data compression is very important as metagenomic projects are facing the challenges of larger data volumes per sample and more samples nowadays. The reference-based compression is a promising method to obtain a high compression ratio. However, existing microbial reference genome databases are not suitable to be directly used as references for compression due to their large size and redundancy, and dif...

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Literature Corpus work
c8d807be-7e68-55d9-be38-bb842ed9abfc
DOI
10.1101/2023.09.12.557346
Open publication

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A pipeline for constructing reference genomes for large cohort-specific metagenome compressionDOI 10.1101/2023.09.12.557346
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