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viGEN: An open source pipeline for the detection and quantification of viral RNA in human tumors

2017-01-11

Abstract excerpt

<h4>ABSTRACT</h4> An estimated 17% of cancers worldwide are associated with infectious causes. The extent and biological significance of viral presence/infection in actual tumor samples is generally unknown but could be measured using human transcriptome (RNA-seq) data from tumor samples. We present an open source bioinformatics pipeline viGEN, which combines existing well-known and novel RNA-seq tools for not on...

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Literature Corpus work
aac2b4e8-386c-561b-9994-4a3fd17f9b2b
DOI
10.1101/099788
Open publication

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