Article

VirTect: a computational method for detecting virus species from RNA-Seq and its application in head and neck squamous cell carcinoma

2018-02-26

Abstract excerpt

Next generation sequencing (NGS) provides an opportunity to detect viral species from RNA-seq data on human tissues, but existing computational approaches do not perform optimally on clinical samples. We developed a bioinformatics method called VirTect for detecting viruses in neoplastic human tissues using RNA-seq data. Here, we used VirTect to analyze RNA-seq data from 363 HNSCC (head and neck squamous cell carc...

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Literature Corpus work: 3639b006-5a3a-5bb7-aa21-42d4a9777931
DOI: 10.1101/272278

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