GBStools: A Unified Approach for Reduced Representation Sequencing and Genotyping

Abstract excerpt

Reduced representation sequencing methods such as genotyping-by-sequencing (GBS) enable low-cost measurement of genetic variation without the need for a reference genome assembly. These methods are widely used in genetic mapping and population genetics studies, especially with non-model organisms. Variant calling error rates, however, are higher in GBS than in standard sequencing, in particular due to restriction...

Topics

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• Algorithms
• Alleles
• Genetics, Population
• Genotyping Techniques
• High-Throughput Nucleotide Sequencing
• Polymorphism, Single Nucleotide
• Software
• Statistics as Topic

Identifiers and source

Literature Corpus work

a3cc1abe-4a90-58d2-bcf4-6545367c85ce

DOI

10.1101/030494