cytoNet: Spatiotemporal Network Analysis of Cell Communities

Abstract excerpt

We introduce cytoNet, a cloud-based tool to characterize cell populations from microscopy images. cytoNet quantifies spatial topology and functional relationships in cell communities using principles of network science. Capturing multicellular dynamics through graph features, cytoNet also evaluates the effect of cell-cell interactions on individual cell phenotypes. We demonstrate cytoNet’s capabilities in four cas...

Topics

Open a Topic to create a Post that cites this publication.

• Algorithms
• Cell Lineage
• Ecology
• Histological Techniques
• Machine Learning
• Mice
• Phenotype
• Software

Identifiers and source

Literature Corpus work

9fcf5c96-ed42-5836-a729-6071cac86927

DOI

10.1101/180273