Analysis of community connectivity in spatial transcriptomics data

Abstract excerpt

The advent of high throughput spatial transcriptomics (HST) has allowed for unprecedented characterization of spatially distinct cell communities within a tissue sample. While a wide range of computational tools exist for detecting cell communities in HST data, none allow for characterization of community connectivity, i.e., the relative similarity of cells within and between found communities – an analysis task t...

Topics

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• Algorithms
• Cluster Analysis
• Neural Networks, Computer
• Phenotype

Identifiers and source

Literature Corpus work

1a16f39f-002f-5aee-89e4-ab6d7d1bb991

DOI

10.1101/2022.04.11.487907