Article

CarveMe-GutMicrobes: Automated Metabolic Model Reconstruction for Gut Microbial Species and Communities

2026-06-28

Abstract excerpt

Genome-scale metabolic models (GSMMs) are important aids towards system-level understanding of the metabolic physiology of the gut microbes and for rational microbiome engineering. While large-scale repositories of GSMMs for gut-associated bacteria are available, strain-level variability and the continuous discovery of novel taxa through metagenomics and culturomics underscore the need for scalable, ab initio reco...

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Literature Corpus work: 9b790ed9-1f18-5eea-a2d9-d41c930c9ac5
DOI: 10.64898/2026.06.26.734454

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