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Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data with SpaTalk

2022-04-13

Abstract excerpt

Spatially resolved transcriptomics (ST) provides genetic information in space toward elucidation of the spatial architecture in intact organs and the spatially resolved cell-cell communications mediating tissue homeostasis, development, and disease. To facilitate inference of spatially resolved cell-cell communications from ST data, we here present SpaTalk, which relies on a graph network and knowledge graph to mo...

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Literature Corpus work
9697deec-1cf4-5414-8c2c-0edfcc392cb0
DOI
10.1101/2022.04.12.488047
Open publication

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Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data with SpaTalkDOI 10.1101/2022.04.12.488047
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