Article

Estimating the reproduction number, <i>R</i> <sub>0</sub> , from agent-based models of tree disease spread

2023-08-05

Abstract excerpt

Tree populations worldwide are facing an unprecedented threat from a variety of tree diseases and invasive pests. Their spread, exacerbated by increasing globalisation and climate change, has an enormous environmental, economic and social impact. Computational agent-based models are a popular tool for describing and forecasting the spread of tree diseases due to their flexibility and ability to reveal collective b...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 913a3d5e-7be8-59c1-ab17-37be0a126389
DOI: 10.1101/2023.08.03.551748

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Estimating the reproduction number, <i>R</i> <sub>0</sub> , from agent-based models of tree disease spreadDOI 10.1101/2023.08.03.551748Read

Instantaneous Reproduction Number Estimation From Modelled IncidenceSemantic proximity Read

Developing methodologies and software for Bayesian inference of transmission trees from epidemiological and genetic dataSemantic proximity Read

Inference for Nonlinear Epidemiological Models Using Genealogies and Time SeriesSemantic proximity Read

Bayesian inference for spatio-temporal stochastic transmission of plant disease in the presence of roguing: a case study to estimate the dispersal distance of Flavescence doréeSemantic proximity Read

EpiFusion: Joint inference of the effective reproduction number by integrating phylodynamic and epidemiological modelling with particle filteringSemantic proximity Read

EpiModel: An <tt>R</tt> Package for Mathematical Modeling of Infectious Disease over NetworksSemantic proximity Read

A sub-exponential branching process to study early epidemic dynamics with application to EbolaSemantic proximity Read

Memory-based incremental parameter updating of a generic stochastic plant epidemic modelSemantic proximity Read

An introduction to compartmental modeling for the budding infectious disease modelerSemantic proximity Read

Principled simulation of agent-based models in epidemiologySemantic proximity Read

Time-varying reproduction number estimation: Fusing compartmental models with generalised additive modelsSemantic proximity Read

Estimating individuals’ genetic and non-genetic effects underlying infectious disease transmission from temporal epidemic dataSemantic proximity Read