Article

Investigating the performance of foundation models on human 3’UTR sequences

2024-02-12

Abstract excerpt

Foundation models, such as DNABERT and Nucleotide Transformer have recently shaped a new direction in DNA research. Trained in an unsupervised manner on a vast quantity of genomic data, they can be used for a variety of downstream tasks, such as promoter prediction, DNA methylation prediction, gene network prediction or functional variant prioritization. However, these models are often trained and evaluated on ent...

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Literature Corpus work: 6891069d-380f-5ba9-bb55-d579ed13cabd
DOI: 10.1101/2024.02.09.579631

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