Article

Chaining for Accurate Alignment of Erroneous Long Reads to Acyclic Variation Graphs <sup>*</sup>

2022-01-07

Abstract excerpt

Aligning reads to a variation graph is a standard task in pangenomics, with downstream applications such as improving variant calling. While the vg toolkit (Garrison et al., Nature Biotechnology , 2018) is a popular aligner of short reads, GraphAligner (Rautiainen and Marschall, Genome Biology , 2020) is the state-of-the-art aligner of erroneous long reads. GraphAligner works by finding candidate read occurre...

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Literature Corpus work: 4fe2d5b1-5c78-5ce7-9f64-38320afc2bd9
DOI: 10.1101/2022.01.07.475257

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