Article

Pangenome graph layout by Path-Guided Stochastic Gradient Descent

2023-09-23

Abstract excerpt

<h4>Motivation</h4> The increasing availability of complete genomes demands for models to study genomic variability within entire populations. Pangenome graphs capture the full genomic similarity and diversity between multiple genomes. In order to understand them, we need to see them. For visualization, we need a human readable graph layout: A graph embedding in low (e.g. two) dimensional depictions. Due to a pan...

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Literature Corpus work: 4b3ce385-7712-59ec-a14a-f631045fab72
DOI: 10.1101/2023.09.22.558964

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