Article

Somatic variant analysis of linked-reads sequencing data with Lancet

2020-07-06

Abstract excerpt

<h4>Summary</h4> We present a new version of the popular somatic variant caller, Lancet, that supports the analysis of linked-reads sequencing data. By seamlessly integrating barcodes and haplotype read assignments within the colored De Bruijn graph local-assembly framework, Lancet computes a barcode-aware coverage and identifies variants that disagree with the local haplotype structure. <h4>Availability and Im...

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Literature Corpus work: 30a8fe90-d1af-5b62-9a21-dd8045b844f6
DOI: 10.1101/2020.07.04.158063

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