Article

TNMplot.com: a web tool for the comparison of gene expression in normal, tumor and metastatic tissues

2020-11-11

Abstract excerpt

<h4>ABSTRACT</h4> Genes showing higher expression in either tumor or metastatic tissues can help in better understanding tumor formation, and can serve as biomarkers of progression or as therapy targets with minimal off-target effects. Our goal was to establish an integrated database using available transcriptome-level datasets and to create a web-platform enabling mining of this database by comparing normal, tum...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 2c839628-06b5-5597-b712-b7697f062b6f
DOI: 10.1101/2020.11.10.376228

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

TNMplot.com: a web tool for the comparison of gene expression in normal, tumor and metastatic tissuesDOI 10.1101/2020.11.10.376228Read

BEST: a web application for comprehensive biomarker exploration on large-scale data in solid tumorsSemantic proximity Read

Charting the transcriptomic landscape of primary and metastatic cancers in relation to their origin and target normal tissuesSemantic proximity Read

Discovering Breast Cancer Biomarkers Candidates through mRNA Expression Analysis Based on The Cancer Genome Atlas DatabaseSemantic proximity Read

RNA-Seq Atlas—a reference database for gene expression profiling in normal tissue by next-generation sequencingSemantic proximity Read

MetaGxData: Clinically Annotated Breast, Ovarian and Pancreatic Cancer Datasets and their Use in Generating a Multi-Cancer Gene SignatureSemantic proximity Read

Charting the transcriptomic landscape of primary and metastatic cancers in relation to their origin and target normal tissuesSemantic proximity Read

LCE: an open web portal to explore gene expression and clinical associations in lung cancerSemantic proximity Read

Lung Cancer Explorer (LCE): an open web portal to explore gene expression and clinical associations in lung cancerSemantic proximity Read

Multi-omics integration in Esophageal Adenocarcinoma reveals therapeutic targets and EAC-specific regulation of protein abundancesSemantic proximity Read

UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival AnalysesSemantic proximity Read

Pathogenic impact of transcript isoform switching in 1209 cancer samples covering 27 cancer types using an isoform-specific interaction networkSemantic proximity Read

Identification of FAT4 Mutation as a Prognostic Marker for Overall Survival and Immune Landscape in Lung AdenocarcinomaSemantic proximity Read