Article

Shared genomic variants: identification of transmission routes using pathogen deep sequence data

2015-11-20

Abstract excerpt

Sequencing pathogen samples during a communicable disease outbreak is becoming an increasingly common procedure in epidemiological investigations. Identifying who infected whom sheds considerable light on transmission patterns, high-risk settings and subpopulations, and infection control effectiveness. Genomic data shed new light on transmission dynamics, and can be used to identify clusters of individuals likely...

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Literature Corpus work: 225164a6-f234-5129-939c-541a36c6d022
DOI: 10.1101/032458

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