Article

A pangenome and pantranscriptome of hexaploid oat

2024-10-27

Abstract excerpt

Oat grain is a traditional human food rich in dietary fiber that contributes to improved human health. Interest in the crop has surged in recent years owing to its use as the basis for plant-based milk analogs. Oat is an allohexaploid with a large, repeat-rich genome that was shaped by subgenome exchanges over evolutionary timescales. In contrast to many other cereal species, genomic research in oat is still at an...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 1e9dac68-b964-5003-a8a2-b947077556ea
DOI: 10.1101/2024.10.23.619697

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

A pangenome and pantranscriptome of hexaploid oatDOI 10.1101/2024.10.23.619697Read

A pangenome and pantranscriptome of hexaploid oatSemantic proximity Read

Reference genome assemblies reveal the origin and evolution of allohexaploid oatSemantic proximity Read

Analysis and annotation of the hexaploid oat seed transcriptomeSemantic proximity Read

Genome-wide association mapping for grain and forage quality traits in a subtropical oat germplasm collection adapted to highland regions of Eastern AfricaSemantic proximity Read

Genome analysis in Avena sativa reveals hidden breeding barriers and opportunities for oat improvement.Semantic proximity Read

A natural variation within duplicated AsWRKY49-D2 drives the subgenomic functional divergence of homeologs in salt response of allohexaploid oats.Semantic proximity Read

A Consensus Map in Cultivated Hexaploid Oat Reveals Conserved Grass Synteny with Substantial Subgenome Rearrangement.Semantic proximity Read

Structural variation in the pangenome of wild and domesticated barley.Semantic proximity Read

Dynamics of genome evolution in the era of pangenome analysis.Semantic proximity Read

Functional cereal pan-genomics: harnessing structural and regulatory variation for precision crop design.Semantic proximity Read

Adaptive diversification through structural variation in barleySemantic proximity Read

SNP discovery and chromosome anchoring provide the first physically-anchored hexaploid oat map and reveal synteny with model species.Semantic proximity Read