Article
SNP discovery and chromosome anchoring provide the first physically-anchored hexaploid oat map and reveal synteny with model species.
PloS one - 1 Jan 2013
Oliver Rebekah E, Tinker Nicholas A, Lazo Gerard R, Chao Shiaoman, Jellen Eric N, Carson Martin L, Rines Howard W, Obert Donald E, Lutz Joseph D, Shackelford Irene, Korol Abraham B, Wight Charlene P, Gardner Kyle M, Hattori Jiro, Beattie Aaron D, Bjørnstad Åsmund, Bonman J Michael, Jannink Jean-Luc, Sorrells Mark E, Brown-Guedira Gina L, Mitchell Fetch Jennifer W, Harrison Stephen A, Howarth Catherine J, Ibrahim Amir, Kolb Frederic L, McMullen Michael S, Murphy J Paul, Ohm Herbert W, Rossnagel Brian G, Yan Weikai, Miclaus Kelci J, Hiller Jordan, Maughan Peter J, Redman Hulse Rachel R, Anderson Joseph M, Islamovic Emir, Jackson Eric W
Abstract excerpt
A physically anchored consensus map is foundational to modern genomics research; however, construction of such a map in oat (Avena sativa L., 2n = 6x = 42) has been hindered by the size and complexity of the genome, the scarcity of robust molecular markers, and the lack of aneuploid stocks. Resources developed in this study include a modified SNP discovery method for complex genomes, a diverse set of oat SNP...
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