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Analysis and annotation of the hexaploid oat seed transcriptome

11 Jul 2013

Abstract excerpt

BACKGROUND: Next generation sequencing provides new opportunities to explore transcriptomes. However, challenges remain for accurate differentiation of homoeoalleles and paralogs, particularly in polyploid organisms with no supporting genome sequence. In this study, RNA-Seq was employed to generate and characterize the first gene expression atlas for hexaploid oat. RESULTS: The software packages Trinity and Oases...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 23845136
DOI: 10.1186/1471-2164-14-471

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