Article
Structural variation in the pangenome of wild and domesticated barley.
Nature - 1 Dec 2024
Jayakodi Murukarthick, Lu Qiongxian, Pidon Hélène, Rabanus-Wallace M Timothy, Bayer Micha, Lux Thomas, Guo Yu, Jaegle Benjamin, Badea Ana, Bekele Wubishet, Brar Gurcharn S, Braune Katarzyna, Bunk Boyke, Chalmers Kenneth J, Chapman Brett, Jørgensen Morten Egevang, Feng Jia-Wu, Feser Manuel, Fiebig Anne, Gundlach Heidrun, Guo Wenbin, Haberer Georg, Hansson Mats, Himmelbach Axel, Hoffie Iris, Hoffie Robert E, Hu Haifei, Isobe Sachiko, König Patrick, Kale Sandip M, Kamal Nadia, Keeble-Gagnère Gabriel, Keller Beat, Knauft Manuela, Koppolu Ravi, Krattinger Simon G, Kumlehn Jochen, Langridge Peter, Li Chengdao, Marone Marina P, Maurer Andreas, Mayer Klaus F X, Melzer Michael, Muehlbauer Gary J, Murozuka Emiko, Padmarasu Sudharsan, Perovic Dragan, Pillen Klaus, Pin Pierre A, Pozniak Curtis J, Ramsay Luke, Pedas Pai Rosager, Rutten Twan, Sakuma Shun, Sato Kazuhiro, Schüler Danuta, Schmutzer Thomas, Scholz Uwe, Schreiber Miriam, Shirasawa Kenta, Simpson Craig, Skadhauge Birgitte, Spannagl Manuel, Steffenson Brian J, Thomsen Hanne C, Tibbits Josquin F, Nielsen Martin Toft Simmelsgaard, Trautewig Corinna, Vequaud Dominique, Voss Cynthia, Wang Penghao, Waugh Robbie, Westcott Sharon, Rasmussen Magnus Wohlfahrt, Zhang Runxuan, Zhang Xiao-Qi, Wicker Thomas, Dockter Christoph, Mascher Martin, Stein Nils
Abstract excerpt
Pangenomes are collections of annotated genome sequences of multiple individuals of a species1. The structural variants uncovered by these datasets are a major asset to genetic analysis in crop plants2. Here we report a pangenome of barley comprising long-read sequence assemblies of 76 wild and domesticated genomes and short-read sequence data of 1,315 genotypes. An expanded catalogue of sequence variation in the...
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