Article
A protein dynamics-based deep learning model enhances predictions of fitness and epistasis.
Proceedings of the National Academy of Sciences of the United States of America - 21 Oct 2025
Huynh Ngoc, Kazan I Can, Lu Jin, Kolbaba-Kartchner Bethany, Mills Jeremy H, Ozkan S Banu
Abstract excerpt
Deep learning has advanced our ability to assess the effects that individual mutations have on protein function; however, predicting the complex interplay between two or more mutations remains challenging. Here, we seek to address this challenge by building a deep learning framework that incorporates information related to protein dynamics. Namely, we build a neural network architecture using a physics-based...
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