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NanoMnT: an STR analysis tool for Oxford Nanopore sequencing data driven by a comprehensive analysis of error profile in STR regions.

GigaScience - 6 Jan 2025

Park Gyumin, An Hyunsu, Luo Han, Park Jihwan

Abstract excerpt

Oxford Nanopore Technology (ONT) sequencing is a third-generation sequencing technology that enables cost-effective long-read sequencing, with broad applications in biological research. However, its high sequencing error rate in low-complexity regions hampers its applications in short tandem repeat (STR)-related research. To address this, we generated a comprehensive STR error profile of ONT by analyzing publicly...

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PMID: 40094553
DOI: 10.1093/gigascience/giaf013
PMCID: PMC11912559

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