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microGWAS: a computational pipeline to perform large-scale bacterial genome-wide association studies.

Microbial genomics - 1 Feb 2025

Burgaya Judit, Damaris Bamu F, Fiebig Jenny, Galardini Marco

Abstract excerpt

Identifying genetic variants associated with bacterial phenotypes, such as virulence, host preference and antimicrobial resistance, has great potential for a better understanding of the mechanisms involved in these traits. The availability of large collections of bacterial genomes has made genome-wide association studies (GWAS) a common approach for this purpose. The need to employ multiple software tools for...

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Identifiers

PMID: 39932497
DOI: 10.1099/mgen.0.001349
PMCID: PMC12452030

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