Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

CanCellVar: A database for single-cell variants map in human cancer.

American journal of human genetics - 11 Jul 2024

Yang Changbo, Liu Yujie, Lv Chongwen, Xu Mengjia, Xu Kang, Shi Jingyi, Tan Tingting, Zhou Weiwei, Lv Dezhong, Li Yongsheng, Xu Juan, Shao Tingting

Abstract excerpt

Numerous variants, including both single-nucleotide variants (SNVs) in DNA and A>G RNA edits in mRNA as essential drivers of cellular proliferation and tumorigenesis, are commonly associated with cancer progression and growth. Thus, mining and summarizing single-cell variants will provide a refined and higher-resolution view of cancer and further contribute to precision medicine. Here, we established a database,...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Databases, Genetic
Share to Neoplasms

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Polymorphism, Single Nucleotide

Share to Single-Cell Analysis

Share to Tumor Microenvironment

Source

Open in PubMed Open full text

Identifiers

PMID: 38838674
DOI: 10.1016/j.ajhg.2024.05.014
PMCID: PMC11267512

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

CanCellVar: A database for single-cell variants map in human cancer.PMID 38838674Read ↗

scTML: a pan-cancer single-cell landscape of multiple mutation types.Semantic proximity Read ↗

Joint analysis of expression and variation at single cell resolution by scVarSemantic proximity Read ↗

Single-cell RNA-seq variant analysis for exploration of genetic heterogeneity in cancerSemantic proximity Read ↗

Functional phenotyping of genomic variants using joint multiomic single-cell DNA-RNA sequencing.Semantic proximity Read ↗

A 3D genome atlas of genetic variants and their pathological effectsSemantic proximity Read ↗

Single-Cell Sequencing: Genomic and Transcriptomic Approaches in Cancer Cell BiologySemantic proximity Read ↗

Genomic basis for RNA alterations revealed by whole-genome analyses of 27 cancer typesSemantic proximity Read ↗

Annotations of Recurrent Structural Variant Events in Pan-cancer Whole Genome Data for Precision MedicineSemantic proximity Read ↗

Identification of malignant cells in single-cell transcriptomics dataSemantic proximity Read ↗

CACSV: a computational web-sever that provides classification for cancer somatic genetic variants from different tissues.Semantic proximity Read ↗

SCANBIT facilitates identification of tumor cell populations in scRNAseq data using pseudobulked SNV callsSemantic proximity Read ↗

CancerSCEM: a database of single-cell expression map across various human cancersSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.