Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Haplotype determination of the Bombyx mori nucleopolyhedrovirus by Nanopore sequencing and linkage of single nucleotide variants.

The Journal of general virology - 1 May 2024

Wennmann Jörg T, Lim Fang-Shiang, Senger Sergei, Gani Mudasir, Jehle Johannes A, Keilwagen Jens

Abstract excerpt

Naturally occurring isolates of baculoviruses, such as the Bombyx mori nucleopolyhedrovirus (BmNPV), usually consist of numerous genetically different haplotypes. Deciphering the different haplotypes of such isolates is hampered by the large size of the dsDNA genome, as well as the short read length of next generation sequencing (NGS) techniques that are widely applied for baculovirus isolate characterization. In...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Bombyx
Share to Genome, Viral

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Haplotypes

Share to High-Throughput Nucleotide Sequencing

Share to Nanopore Sequencing

Share to Nucleopolyhedroviruses

Share to Polymorphism, Single Nucleotide

Source

Identifiers

PMID: 38767624
DOI: 10.1099/jgv.0.001983

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Haplotype determination of the Bombyx mori nucleopolyhedrovirus by Nanopore sequencing and linkage of single nucleotide variants.PMID 38767624Read ↗

Patterns in Genotype Composition of Indian Isolates of the Bombyx mori Nucleopolyhedrovirus and Bombyx mori Bidensovirus.Semantic proximity Read ↗

Phylogenetic analysis of Bombyx mori nucleopolyhedrovirus polyhedrin and p10 genes in wild isolates from Guangxi Zhuang Autonomous Region, China.Semantic proximity Read ↗

BAsE-Seq: a method for obtaining long viral haplotypes from short sequence reads.Semantic proximity Read ↗

Mining single nucleotide polymorphisms from EST data of silkworm, Bombyx mori, inbred strain Dazao.Semantic proximity Read ↗

Bacsnp: Using Single Nucleotide Polymorphism (SNP) Specificities and Frequencies to Identify Genotype Composition in Baculoviruses.Semantic proximity Read ↗

Long Single-Molecule Reads Can Resolve the Complexity of the Influenza Virus Composed of Rare, Closely Related Mutant Variants.Semantic proximity Read ↗

Genomic diversity of Bombyx mori nucleopolyhedrovirus strains.Semantic proximity Read ↗

Direct sequencing of RNA with MinION Nanopore: detecting mutations based on associations.Semantic proximity Read ↗

Ultra Deep Sequencing of a Baculovirus Population Reveals Widespread Genomic Variations.Semantic proximity Read ↗

Distribution and genetic diversity of Bombyx mori nucleopolyhedrovirus in mass-reared silkworms in Thailand.Semantic proximity Read ↗

Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations.Semantic proximity Read ↗

Genome of a Bombyx mori nucleopolyhedrovirus strain isolated from India.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.